LOCUS BAK67219.1 506 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative exopolysaccharide biosynthesis
protein protein.
ACCESSION AP012222-2544
PROTEIN_ID BAK67219.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_25440"
/transl_table=11
BEGIN
1 MNNLYEELQI ILHGIWQRRW VALSVAWGVC LLGWLAVALV PNVYQSRARV FVQMDSVLPG
61 SLNDSPLDQQ KALDQVRQTM TSAEVLDRVV RNTDLGAGAV SDRDIGAKVG LLRQNVQVLS
121 QQDNLFEITA NWSDRALGAG ENARMAAQVV AGLIQAFQET NAAGGIADAS HSLKFLDAQI
181 AARAKELEST EQKRVAFEQQ HLGSVPGGGS ISARAEAMRA EVSQIDSQLV SARSALAGIN
241 GQLAGTPADI VSAVGPTGGL SALAQAEGQL ASARAQGWTD NHPDVVALKR QIETLRKLGS
301 GAAGGTRTPN PAYLSLRAMQ AERGSTVSAL QARKAQLEGD LNALTRKQID EPGLAAEQDR
361 LNRDYDAVKQ QYDKLLADRE AVRLRGDVQS EGGAFKFRVI DPPSLSPIPA SPNRPLLLFA
421 VLVTGIGAGI AAAFALSQIR TTYPTTGRLE KATGLPVIGG ISEVETPARA QRIRQHARWF
481 YAGCGGLGAM CFVLLAVEFI QRGMSA
//