LOCUS BAK67175.1 462 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 syringate O-demethylase protein.
ACCESSION AP012222-2500
PROTEIN_ID BAK67175.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /gene="desA"
/locus_tag="SLG_25000"
/transl_table=11
BEGIN
1 MAKSLQDVLD NAGNAVDFLR NQQTGPNVYP GVPAEYSNWR NEQRAWAKTA VLFNQSYHMV
61 ELMVEGPDAF AFLNYLGINS FKNFAPGKAK QWVPVTAEGY VIGDVILFYL AENQFNLVGR
121 APAIEWAEFH AATGKWNVTL TRDERTALRT DGVRRHYRFQ LQGPNAMAIL TDAMGQTPPD
181 LKFFNMADIQ IAGKTVGALR HGMAGQPGYE LYGPWADYEA VHSALVAAGK NHGLALVGGR
241 AYSSNTLESG WVPSPFPGYL FGEGSADFRK WAGENSYGAK CSIGGSYVPE SLEGYGLTPW
301 DIGYGIIVKF DHDFIGKEAL EKMANEPHLE KVTLALDDED MLRVMSSYFS DSGRAKYFEF
361 PSAVYSMHPY DSVLVDGKHV GVSTWVGYSS NEGKMLTLAM IDPKYAKPGT EVSLLWGEPN
421 GGTSKPTVEP HEQTEIKAVV APVPYSAVAR TGYADSWRTK KA
//