LOCUS BAK67150.1 471 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative Xre family transcriptional
regulator protein.
ACCESSION AP012222-2475
PROTEIN_ID BAK67150.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_24750"
/transl_table=11
BEGIN
1 MSRGTRLFVG QKVRQLRLDN RMDQKAMARL LDISVSYLSQ LENNDRPLTA KVKAALASAF
61 PLDWSAFDER QEEQLLGAFN WALANPGLGS PPPDPERAER LHLHYPDFAA RYVELHHALR
121 QTQERLAMME EAIASDAAPA ARAPWETVRD WFHESGNYIH ALDVAAEDLC ARLGLGGPDN
181 EARLLRALEE RHQCRVSPSE SDRTMLRRYD AAGRQLSINA ALPLPSRAFQ IANQLMQFEL
241 GGDMAAIMAE AQLGDPVADQ LLLLGLANYA AGALLMPYGH FRQSARSLRH DIDPLARQFG
301 VSFEQACHRL STLQRPGQRG IPFFFCRVDM AGNITKRHSA TRLQFARFGG ACPLWGVHEA
361 VAIPDRIIVQ LAEMPDGMRY VSMARGLVKP SGSYARAPRR YAVVLGCEIE HAGNFIYADG
421 LRLTDEAAAT PIGMSCRLCP REGCDQRAFP PLDRPIHIER DHRGIVPYGI G
//