LOCUS BAK67140.1 348 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative alanine racemase protein.
ACCESSION AP012222-2465
PROTEIN_ID BAK67140.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="5.1.1.1"
/gene="alr"
/locus_tag="SLG_24650"
/transl_table=11
BEGIN
1 MTELPSAPLA LHLDSAALKS NWQWLARRSG DARCGAAIKA NGYGLGAIEV MRHLKAAGCR
61 DFFVATWREA AALMPHRGDA SLSVLHGVRA EDMAFARGCP VRPVLNSVGQ VARWKAAGGG
121 PCDLMVDTGM SRLGLDPQDI SADLLEGLEI ETLLSHLACA DEDHPLNAAQ CALFHDVAAR
181 VPAKRLSLAN SAGILLGPDY HFDLTRPGLA LYGGVPRPEA AGHLAQVVRP RAQILQRRTV
241 KSGAIVGYGA TFRAPDQREV AVLNVGYADG YLRGFSSTGA ALADGVRLPV LGRVSMDLLI
301 VDVSQVPSLG EGDWVELDYD LTLAAAQSGL SQYELLTGLG ARYERVWR
//