LOCUS BAK67135.1 800 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 TonB-dependent receptor-like protein protein.
ACCESSION AP012222-2460
PROTEIN_ID BAK67135.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_24600"
/transl_table=11
BEGIN
1 MKTLLVAPAI LLASTSAFAQ GTQPQGSTTT ADTYGDEIIV TAQKREQSLQ DVSAAVSALS
61 ADRIVNAGVS SISDLQTIVP SVNFGSDFNQ AKIFIRGVGA NTSTTGSSTG VAFHVDGAYV
121 ARAEAQLTSL FDLERLEVLR GPQGTLYGRN AVGGSINVIT AKPTATLQGY GRFSYGNYNA
181 LTAEAAVSGP ITDSIRARLA IKTEDRDGFG MNPVSGKDVD DLNRRMGRAQ IEFDLGPEAS
241 LLLAGEYFRQ SDASGAIHYL RASFPGVARL APLGVGGYAT HPRDLATESD PGTETETYAF
301 TGTLEVPLND ALTISNIANY RSFKSSLFQD LDLSAVIDSL PTNGQATTVQ ERRIDSKQWS
361 NELRLGLSSE WINGTIGVFY FHERQRPIDN VGLQNRNGMA QNIAVLEAAG ISLAEAYNLC
421 GYSPDGVTGG STIIAPKRVC TKSNLSTDAF SIFGQYAIGL GMFGDALSAF TVKLGGRWSS
481 EHVESENPSI IITRNGLGPI VRHTPESTHV EKTFRDFTPE AGIEWKASDD ILVYYTYSEG
541 FKAGSGENAS GSRTIVDPET ITNHEVGIKA SFGRMLTVNL SGYSYTLDGL QLNKTIAGGP
601 SGYTTIFENA AKTRAKGIEM DVLLRPARGL RLSGAVSYTD AHFVDYLTLD PLNPANIAGG
661 TPYDPVTNPD PTAFGAPGGG EIQLAGNDTR NSPRWSWNVH GEYDVVAPVG TFTPSVDVSY
721 KSRTYFSEYM REIESSAAYA MVDASLAYET NDGRIRAQLW AKNLFDVFRP SSTFALATGR
781 LIGVTWLPPR TYGVSIGYKF
//