LOCUS BAK67124.1 574 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 dihydroxy-acid dehydratase protein.
ACCESSION AP012222-2449
PROTEIN_ID BAK67124.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="4.2.1.9"
/gene="ilvD"
/locus_tag="SLG_24490"
/transl_table=11
BEGIN
1 MTHQFDKSKL PSRHVSVGVE SAPHRSYYYA MGWKEEDIAK PFVALASAGN DSAPCNTTLD
61 QQADWAREGV MAAGGTPFRF NTITVTDGIA MGHQGMKSSL VSREVIADSV ELSVRGHCYD
121 ALVAFAGCDK SLPGMMMAML RLNVPAIFVY GGSILPGTYK DRDDLTVIDV FEAVGRYSAG
181 NCPLAEVVAI EKAACPGHGA CGGQYTANTM ACVAEAIGLS LPNSNMAPAP YKSRQEIAVA
241 AGKQIMDVLA RNIRPRDICT REAFENAARI VAATGGSTNG ALHLPAMANE CGIAFDLFDV
301 AEIFKTTPYM ADLKPGGRYV AKDMHAAGGI YMLMKSLAQT GLLHLDCMTV TGKTLGENID
361 EVTWNPDQKV IHDAKTPITP TGGVVGLKGS LAPEGAIVKV AGMKRLQFTG TAKVFEREED
421 AFAAVEAQQI VDGDVVVIRY EGPKGGPGMR EMLSTTAALY GQGLGEKVAL ITDGRFSGGT
481 RGFCIGHVGP EAADGGPIAL IENGDTIAID AEAGTIDLLV DEAVLAERRA KWQPRTNDYQ
541 AGALWRYSRN VGPARTGAVT HPGARAETHV YADI
//