LOCUS BAK67113.1 308 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative L-threo-3-hydroxy aspartate
dehydratase protein.
ACCESSION AP012222-2438
PROTEIN_ID BAK67113.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="4.3.1.16"
/locus_tag="SLG_24380"
/note="protein synonym:threo-3-hydroxyaspartate
ammonia-lyase"
/transl_table=11
BEGIN
1 MRAAEKVAAL LPPTPLLPLE LDGRTIWCKA EVLQPVGAFK IRGAWHRLSD LDEAQRACGV
61 VGVSSGNHAQ GVAWSARRLG IAATIIMPSN APRAKLEATR ALGAQVVLYD RAREDRDAIA
121 AQMTAQTGAT LVHAYGDPWI IEGQGTLAIE AAAQLRARIG REPDRFVTCC GGGGLTAGVA
181 LACPDAEIHI AEPEGWDDVL RSLAADEILP VADMTYPTDC DALQTPRTFP INFAVLRERV
241 SGGAAVTRAD VAAAMRLAFE KLHLVVEPGG AAALAAVLAG KVDATDATIV TLSGGNVDRE
301 TFLRLLAD
//