LOCUS BAK67011.1 655 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 transketolase protein.
ACCESSION AP012222-2336
PROTEIN_ID BAK67011.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_23360"
/transl_table=11
BEGIN
1 MPVTEKRLAD TIRVLAMDAV QAANSGHPGM PMGMADVATV LFKDHVKFDP AAPKWADRDR
61 FVLSAGHGSM LIYALLHLTG YEEPTMAQIA AFRQVGSPCA GHPENFELPG VEATTGPLGQ
121 GLAMAVGMAM AERHLNATFG DELVDHRTWV IAGDGCLMEG INHEAIGLAG HLGLGRLTVL
181 WDDNKITIDG SVDLSSSEDV LARYAATGWH VTHCDGHDFA DIRRALAEAV ADPRPSIVAC
241 RTRIGQGAPN MAGSHKVHGA PLGKDEIAAT RQALDWDLPP FELPEDVRTA WLAIGQRSRP
301 AHAQWQDRLS SHSQKTEFER RMAGDLPADF SLRPYLDGLI AEPKKVATRK ASEMALDAIN
361 VQLPEMFGGS ADLTGSNLTQ SKDQKAAFSR DDRAGRYVYY GIREFGMAAA MNGMALHGGV
421 IPYGGTFLVF SDYMRNAIRM SALQRLRVVY VLTHDSIGLG EDGPTHQPIE HVMSLRMIPN
481 LEVFRPCDVI ETAECWELAL AQQSTPSVLA LSRQNLPQLR DNASENLSAK GAYTLVSGGD
541 SPRVVLIGTG SEVEIAVEAA KQLGEQGIAA SVVSMPSMSR FLAQDEAYRA AVLPAGALRV
601 TIEAGTTFGW CAITGADGLN IGIDQFGLSG PAPALYEHFG LTAGAIAQRV LAALD
//