LOCUS BAK66970.1 1072 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 hypothetical protein protein.
ACCESSION AP012222-2295
PROTEIN_ID BAK66970.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_22950"
/transl_table=11
BEGIN
1 MAEDAELPEQ AALAHGRRTR LARWIGGSAA LALVAAGGAL WLARKPIADS FIARELAARG
61 VQGRYQVTRI GPRTQRLDNL VIGDPKRPDL VIRSVEVDVG WSLTGARIAA VRASGVRLRG
121 RIADGALSLG SVDRLLGEGG GASQLPDWIV DLNDARADIA TDQGMLVLGM EGRGPLRAGF
181 SGTISLASTG LSVGACRTGR LIAPLDVTTQ EDGIWLKGPV STSAATCTDA GVTLATPRLG
241 VNLRLDPSLR NPSGAITLHA DEARQGDRVF DRLSGLLAFS GKDGDLRGSA SLAATGAAVD
301 GIDTGSVKIG GNFAFRPEAR NRALVWQGMA TIDNARPTRG LKPERVVAAT AGTPVEPLAR
361 RLAQALDALG KQNRLTVGGQ VNLLGGRGNA RLDRLELTSA SGARLSAEEG SVLRFDWPTG
421 AIGATATLDM RGGGLPEGRI RLATGPQGEL RGTATLAPYA AGSARLALAP LTFAIDAAGR
481 GTMSSALTLD GPLPDGAIEG LNMPLRLRFS PRGGVSLASD CVPLRWRSLR SAGVAIDPAG
541 LTLCGAEEGQ IRTGPVRLTG RMGDNRLLFS TRSARYALAT GRFDMAAPDL RIGAGESPVR
601 MAAARLAGAM TGEGGFAGTI EGGAGRIGSV PLDLADIAGR WTLRNGRLSV DGALRVSDTQ
661 ADRRFNPLVG ENVRLTFADG RIDATGTLVH PVRRETIAAV TIRHDLPSGV GRADFTVNDL
721 RFGNRLQPDD VTPLSLGVVA NVDGVVNGQG HIRWSGTDVA SEGSFSTQDM AFAAAFGPVT
781 GFSTSLRFTD LLGLRTQPGQ VMTIRSVNPG IEANDGVIRY ALLSSEEAVI EGGLWPFSGG
841 TLELLPTRLA LDSRKPRSLD FRVVGLDAGA FINKLELENV SATGTFDGLL PMIFDENGGR
901 IEGGLLVARQ QGDAARVLTT TEGLDIPCDQ SRQAGNLSYV GEVSNAKLNA VGKLAFDALK
961 NLRYRCLAVL LDGAIDGEFV TQVRVNGINQ GTEEARKSFL ARPFLGLPFI FNIRIEAPFR
1021 GLLNTATGLA DPTLHIRRQL DEEAASRKEA QSESGLAVQP PDSEKGLERD QE
//