LOCUS BAK66956.1 416 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 lipoprotein-releasing system transmembrane
protein LolC/E family protein protein.
ACCESSION AP012222-2281
PROTEIN_ID BAK66956.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_22810"
/transl_table=11
BEGIN
1 MILARYERMI ARRYLLPGRG EGFIFVVASI SLVAVMLGVA ALIVVMSVMN GFRAELFDKI
61 VGLNGHAVVQ GYGGRLDNWQ AIAEQARKTP GVTSATPLIE QPLLAIFNGR VEAALIRGMT
121 ESDIRENSAL GSKLVAGSLD SVRAGSGKVA IGSRLAENLG VNVGQTISII NPAGRSTPFG
181 TVPRQLPYEV GAIFEIGVYD YDKAFIIMPM EDAQLLLLMG DQVGMVEVQT VDPDRVGEIL
241 APLAKQVEGK ALVIDWRQMN SSLFEALQVD RVVSFVILSL IILVAVFNIL SSLIMLARAK
301 TRDIAILRTM GATWRGLLRI FVTVGLAIGA TGTLAGAALG FIILHFRQGI LDGVQFLTGQ
361 QLWDPSIRFL TTLPSKPDPV EIIGICLMSI GFSFLATLYP ALKAANTDPV QVLRYE
//