LOCUS BAK66897.1 1438 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 hypothetical protein protein.
ACCESSION AP012222-2222
PROTEIN_ID BAK66897.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingomonadaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194, 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_22220"
/transl_table=11
BEGIN
1 MSGVIKAVGK VAGIVAAGLA IATGVGAIAG ATIIAGIASA TAVMTVAGVV SVGASLLTRP
61 KAPSVSPATT DRLTASIDTK AFRKLGFGKT ALATDIRDQE ITGAEQDEVH RFVVLASHKI
121 ASIDELWLDD KLAWTATGGI AAEFLGYLGV EGYTEGSAAN AKNISPRMGN TRRYTGLAWM
181 YLRFKVSGNS KKAESPFAQS IPSRVTIVGK GALVYDPRLD STVPGGFGPM RADDQTTWGW
241 DDDAARNPAL QTLWYLLGWR IQNPVTSEWR LAVGKGIPPA RIDLASFITA ANLCDEPVAL
301 AGGGTQPRYR SDGLFSEGDP TSVVLDQLKA SMNAELDDLD GKIRITVAHN DLATPIADFS
361 EDDILGAFTW DQTAPLEEMF NVVRGTFIDP SPQSLYQAVD FPEVRIDSPD GIDRYQPVNF
421 QTVQDARQAQ RLAKQRIARM LYSGRFTATF GHRAWRVQKN DVVRLTFAPL GWTNKLFRVV
481 QTAVQVDGQV PMVLQVEHAD IYLWDADERP AIEPVEPTTY DPYLNPIYQD IVDPKYGDGT
541 SIDDFRSTVE TQIGDIQDAL EGISGEFVLT GQLTNPSFNI FAYADGTLVS TAGASGTFIV
601 KQGNTVVPAS SVEFSSSASA GVTGSINADG DYSVTGLTVD NGSLTLTAIY AGVPLTQIFK
661 VTRTIVGYEI VSSLPTTNLF EGRVVFLDTD GKLYRYHASA WTKAVEATDI SGQIIASQIS
721 DGAVSIAKFA SGIQPVAIVS SVPGSLSTRA VFNTTDGKLY RWNGSAYVAT VPTTDLTGTI
781 ITAQIADAAL TTAKFASGIQ PVTIVSAVPG SLSTRTVFNT TDGKMYRWNG SAYVATVPTS
841 DLTGTVTDAQ IAGMAASKVT GTLSDSQLAA ISAAKITGQI TSTQITDGAI STPKLAAGSV
901 TAAQIAADTI TAAQIAAGAI TASELAAGSV IAGKIAAGTI QAIDIAAGAI TTAKLAAGAV
961 TANEIAADTI TAGQIAAGAI SASEIAAGAV VAGKIAANAV TSNEILAGSI TTAKIAAGAV
1021 TATQIAADTI TAAQIAAGAI SASEIAAGAV TTNKLAIIPE SLIPDPYFRD PTYWAGGGVD
1081 AGGWFPENSA TGNFIEALGA PSGLTLAPIG ATIKYAWGAV LPFSGVGQVL RLRFRALNPG
1141 ADAMIATLLF RDKNNAVIPV YLSINIPAGT SSPQTFTAQQ VVPEGTCFIQ QVVYNDGSVA
1201 SASHRSITAL KLDVAASAEL LVDGSITASK IVAGSITGDR IAANTIAAGN IGSEQITADK
1261 IAAGAIIAGK IAANAVTALT IAVDTITASK FVTDAGVDLA AIVPGAINTA TSATQVSPVN
1321 MNDTTSSSLP LLATSGIACG ADDFIYLRIR AQITASSSFI GIVYVDRYVN GVLSSTLGGY
1381 IGDSNSFLGV SGAQTRTFTV EDGTHPAGLI HYVLRAVCTG GTATFNNSYI SYRRFAMK
//