LOCUS BAK66893.1 967 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative phage tape measure protein protein.
ACCESSION AP012222-2218
PROTEIN_ID BAK66893.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_22180"
/transl_table=11
BEGIN
1 MPEVDPVILR LLVDNGKFQA EMRNTARLVE STMGRQERSV QNLEAQFRKS SGAIGASLKG
61 LAGTLGAAFT GRELVGLIDG FTRVQNSLRV AGLEGQELAK VQQQLLELSA RYGVSLESLS
121 SLFGNATQAG KELGASQAEI VRLTEATAQS LLITGTSATA ASGAILGLQQ ALASGTVRAE
181 EFNQINEGGL RPLLQAAANA EKYGGSVAKL RQAVIDGKVS SQEFYQAILA GATALESQAA
241 KATLTISGAF ESLNSQLTAY VGEAAKANGV SAALAIGIQK LADNLDLAAG ALAVIAAVLA
301 GRFAASMVVA GAGLVRTQIA AATTAASFNA MTLQATRAST ALTTVGAVGA ATGRALLAAF
361 GGPVGLAVTA LTLGVGYYVI QANAAKAASE DLKNQLQVSA DSLSAAEERA RKAGVEVENL
421 GDKSSSATGD VFSIGRAMKF ASDAASQLAK NAKFAAAATA TLRAVEAERR IAEIDSYGKP
481 NETLSRINAA LGGQKSNEVI NKAFESLQAE RGALQAIAQN ARQEAKVILA TPDAAFNEKS
541 PAPAPAGDDK KKKKGRAGPT AEEIEARFQS ELSNEIQRTI EARRSIAIGA EEQAALERQA
601 LAIAVERYKS DVQADKNYSD AQKAALQAQA DKTAEIERER ININEREALA REQLDVMSGE
661 IANDRDIASA QARLAETRDE RARLEFRLLD LAYEQERAEL EAVLASETAT KAQKDIANAR
721 LAILGQLRGM EAEEIGRRYE SPLERRRRDV RETAANMGDA IQNIELDAVD RLTDGLADAS
781 TEFIKLGGVA GDVLNGIIRD MIRLAAQQAI FGGAGVGGIL GTIGGLFGIG GAGAAASGAD
841 IVFNPQTAAK YGFASGGYTG DGNPGDVAGF VHKGEYVIPA SAVQRIGVAN LDALSSARSM
901 TGVSAASPAS AMNGTIRVAI TMDNDVFTAR VQEASVPVAV EVVRQNGPGL IQAAKAETMR
961 DMTRPRL
//