LOCUS BAK66822.1 741 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative exopolysaccharide biosynthesis
protein protein.
ACCESSION AP012222-2147
PROTEIN_ID BAK66822.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_21470"
/transl_table=11
BEGIN
1 MTSFQKPIRG PSQPVLSLAA GPGPEADEDR SSFVPVLLNY WHTAVRWRLV IAAIFGACLL
61 AGLAVTLLMA PLYTARTGIE ISREQKNVTN VEGVESEQAG RDLEFYATQY SLLKAESLAK
121 RVARRLNLAK SDDFFRAHGV SAEQLQKVDR TGRESGGSSA RERLVMSILL QHVDVQPVRN
181 SRLVDIIYTS RSPEMSALLA NTWVEEFIGS TMDRQFSSTA DARHFLEGRL EMLKARLEQS
241 ERDAVAYASG KNIIPLDEGT DGGTRTPTSR TLASANLEAL NEALQRAQAD RIVAQSRIAG
301 GSAANSVEVL TNPAITQMRA RRAELAAQHS QLMVTFEPEY PAARAVQEQI IALDAAISQE
361 TGRVAKSRQQ DYQEAVRRER DLEQKVGALK AVLDAQRHDA IQYNIYQRDA DTNRQLYDAL
421 LQRYKEVGVA GAVGVNNISV VDEASVPTRP SAPNMTFNLA LALLAGLSLS VAAVIGLEQI
481 DEGIRRPEDV SELLSVPLLG SVPLVKEDPV AELSDPRSQL FESYFSVRST LAFATTHGLP
541 RTVALSSARS GEGKSTTAFA LADLIGRTGK NVLLVDADLR MPSLHRILNM PNEVGLSNLL
601 AGEDDIAAMI QETGRKGLYL LTSGPLPPSP PELLSSTRLA ELLQVFLKDF DHVVIDAPPV
661 LGLADALLIG RTAEGVVFVV EAEKTPRRAI RAALRRLRET GNQIFGATVT KVAAHSGAYG
721 YAYGYRYGYG RKNAPASGED G
//