LOCUS BAK66724.1 422 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 ATP-dependent Clp protease ATP-binding
subunit ClpX protein.
ACCESSION AP012222-2049
PROTEIN_ID BAK66724.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /gene="clpX"
/locus_tag="SLG_20490"
/transl_table=11
BEGIN
1 MTKLTGSDSK STLYCSFCGK SQHEVRKLIA GPTVFICDEC VELCNDIIRE ETKGGLVGRK
61 EGGVPTPQAI CDVLNDYVIG QKRAKRVLSV AVHNHYKRLE HGGKAGDVEL AKSNILLIGP
121 TGCGKTLLAQ TLAKTFDVPF TMADATTLTE AGYVGEDVEN IILKLLQASD YNVEKAQRGI
181 VYIDEIDKIS RKAENPSITR DVSGEGVQQA LLKLMEGTTA SVPPQGGRKH PQQEFLQVDT
241 TNILFICGGA FAGLEKIIGD RLEGKSIGFG AHVAAPEERR TGELLKQSEP EDLLKFGLIP
301 EFVGRLPVIA TLEDLDIAAL VQILTEPKNA LVKQYGKLFE LEDVDLTFTD DALTAIAQRA
361 IERKTGARGL RSIIEAILLD TMFDLPTMEG VTEVVVDKDV VEGRKDPVRV FAEAKRKAGD
421 AA
//