LOCUS BAK66700.1 385 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 D-alanyl-D-alanine carboxypeptidase protein.
ACCESSION AP012222-2025
PROTEIN_ID BAK66700.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="3.4.16.4"
/gene="dac"
/locus_tag="SLG_20250"
/transl_table=11
BEGIN
1 MRFTLPIALA LPFLLSAAQA ATPSYSSTAP VAYMIDLSSG RVLFERDSNK RMPPASMAKM
61 MTAHVAFKLI REGKLKLDQS FTVRPETWRK WHSQGSTMFL SANEQVSVEN LLHGIVTLSG
121 NDACVVLAEG ISGSEEAFTD LMNAEAKRLG MTNSHFGNSN GWPDEGRTYV TARDLGVLAR
181 ASVEETPDLY RQFYTTRSFT WGKTMGGSDI SQANRNPILG RIDGADGLKT GHTEEAGYGF
241 TGSAIQNGRR IVMVVAGLTS FNGRIEESVR FMDWGFKSWR SRPLARKGAV LGQAQVQGGW
301 ARQVDLVAPR DLVATIPASA NGPVKGRIVY NGPVKAPIAQ GQAIATLLVD AGDGETQSLP
361 LVAKEEVSEA GFFGRLWIGF LSLFG
//