LOCUS BAK66676.1 564 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative recombinase protein.
ACCESSION AP012222-2001
PROTEIN_ID BAK66676.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_20010"
/transl_table=11
BEGIN
1 MTRVALYARY SDDKQSPASI EDQFLICREQ ANREGWRIVS SYKDAAISGA SVILRPGIQA
61 LLQDAQMGRF DVLLAEALDR VSRDQADVAT LYKNLHFAGV KIVTLAEGEV SELHVGLKGT
121 MNALFLKDLA KKTHRGLRGR VEKGKSGGGL CYGYDVVRRF SSEGEAVHGE RTINDGEAEV
181 VRQVFRQFAN GLSPHAIACR LNEAGIAAPT GKLWTSTTIR GHAKRGTGLL NNELYIGKLV
241 WNRLRYLKNP QTGKRVSRIN PLSEWIVTEV PDLRILDDEL WQAAKSRQED IAIQYAGVIE
301 ATRSAHNAMN RTHRPKSLLS GLVYCGCCGG SYTLRGQGRF ACSNHIDTRS CSNGHSIARE
361 KLEARVLDGL RDRLMSPEVA AEAIRTCVEE TNRFNRQRRA TDSADRAQLD KVLKAIKGLV
421 TLATEGKGTR SLVDQLLELE AQEDAIRARL AAAPADVPDI HPNISEIYRR KVARFAEALA
481 HPEERQEAAD ALRVLIERIV LTPGDKRGEV NAMLHGEFGT ILEWLDRRNC ANTDSPPEAF
541 ASGGPGMSVS MVAGAGFEPA TFRL
//