LOCUS BAK66659.1 840 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 type IV secretory pathway VirB4
component protein.
ACCESSION AP012222-1984
PROTEIN_ID BAK66659.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_19840"
/transl_table=11
BEGIN
1 MSTNAAHRTL SYQRLRAAVT RDAYSDFLPM VAWVEEEEAF LCIDDGWGQA WELVPAAYMF
61 AHVQQALLGL LNIHFPEGTV LQLITFADPL IDPALDAYLD LKVRPDPLVQ ASARRTADYL
121 RRGTRGLDAL HSIPVRDFRL FLVIKTRVKL GVDLRRQVEE QLAKMGIRRL PPDELVSFYR
181 RIFNGVFAPA PGVFLSESVG GMPAPSIARQ IIEAGPDLFF EGPEVFLGNQ VARCLTPKAP
241 ARRITAERAN RLMGGMRGSA EDSDQIGGPF LYCLSVLFDH SQFEIHKRAQ ILSAQKAAGS
301 FAVEVGKQIE EIGWILDEAS NSRFVSVIPT MWVFGRDSAQ AREMAARAKR LWESEPLPFM
361 VQEESYLLPV LLAASLPFGL YPEKRTLKLL ERDFRMPVKA ATLMAPVQTD FRGGGRPALL
421 YVGRKGQLIT LDLFDPRINN YNFIVSAESG AGKSFLLNNL CQQYYAQGAL IRIIDIGGSY
481 RKLCTLCSGR YIDIGEERLV LNPFDMGLAL DGEDKQSAIA MAVAIVAEMA NASTRKPVTT
541 SEWNLLKSAV QWTVDSGRGV DGIDAVRDWL GRYPDNAVSD LDRVDHLVPV ARELAFNLRD
601 FGSQGAYGHF FNGPSTFDIS RDEFVVLELE RLKALPDLFN VIVMVVVNAV TQELYLSARD
661 KPRFVLCDEA AQFMTRSDGQ DLSRLAEAFG QGYRRARKYQ GSFGIVLQSM NDLMLFGGTG
721 QVILENAATK FLLQGSTYDK AVDNKILDYS GFVLDLLKSV RNAKPHYSEV FIDSPLGLGI
781 ARLVVDPFSY WINTSAPNEV AAFEALVRAG RNPLEAVCEL AGVDPVEVLG GAGPEGWRVA
//