LOCUS BAK66657.1 443 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 conjugal transfer protein TraB protein.
ACCESSION AP012222-1982
PROTEIN_ID BAK66657.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_19820"
/transl_table=11
BEGIN
1 MSGEMGKDPA QGPEELSPYQ AHLAGEGARE RDEAIRRPSP ALLDWKAQWS KLSARQKLRA
61 RQLAVGVAVG AIGFGLYTVS GSKEEAKPAN PASSLNMGAG LRGDSLEVKL RGDFKKVLDG
121 QQLLGDRISA IEEGKVVPGS RSPGRGAAGG VDGDLPPALP DSVPALPYPP ETGDVGADAD
181 KLPAPPNGPV APPAPPAPPV EKTVGAIGTA TGQVVAQGAD ASASSKKKNR TIYLPPGFMK
241 ARLLTGIDAL ASRDATSNPE PIIARVQAPA VLPNEVKANL AGCFVIGNAT GSLAKERVEV
301 QLVSLSCVDF DEHSIVDQPV KGFFVDTDGK KGLSGKVVTR AGATLARAFI AGTISGISQS
361 VEGTFGNMST SALGTIRTLD AGDAAKSGIA GGLSKSSDKL TDFYLDLARQ AGPIVEVGAA
421 KDVVVVIQEG ATLEIKPGAG VKF
//