LOCUS BAK66575.1 405 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative acyl-CoA dehydrogenase protein.
ACCESSION AP012222-1900
PROTEIN_ID BAK66575.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_19000"
/transl_table=11
BEGIN
1 MATNPTIGEG RTLIADSADA LDRVRGLLPA IRERARMVDE DRHVSDATID ELRQSGLFNI
61 VTPKTLGGSE LGFADLVRVT AEIAAVCGST GWVYGVLAGH SWLLNLFPAA AQDDVFSNPD
121 ALIATVFRLA GKVEEVEGGY RLQGGDGRFC SGIDFADWVI IGNGITRADG SFEPRFFVIP
181 RSEIEVVDDW YTVGMRGTGS RTIRIADSFI PAHRSVSLAE MLSGNSPGAN AHKGAIYRMP
241 FADIAPFSII GAPIGMAQGA VRNFAEQLGQ RLSDAGDVEL GEQSATYARI AQASAEVDAA
301 LALVLRDAEL IDRAHSPADI SPLDRARIPR DWAWAAQTAR YAATRIFEAS GGSGIYDGHG
361 LQRVWRDVNS AAQHFAFTWD SAMSRYGRAA SGLKPSEFAL PNRRK
//