LOCUS BAK66557.1 780 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 TonB-dependent receptor-like protein protein.
ACCESSION AP012222-1882
PROTEIN_ID BAK66557.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_18820"
/transl_table=11
BEGIN
1 MKTKFYGTSR LQVKKALRRG GAAFALLLSG VSLPALAQDA GQSSPQDTAS STGIADIIVT
61 ASRRAENLQK ESRAISVVGA EQLARQGVTG AEAVQDLVPG LTIARNGPQL QVSIRGVGDR
121 TINASTDPAI AINVDGIYYP KSFEANASFF DLERVEVLKG PQGTLYGRNA SSGAINLITA
181 KPKFETSGFA EVEIGNYGNQ RGTAAINTSF GDAVAVRLSG QIVDREGYLT DGLNDDKSKA
241 VRLQVLIAPT DVTSLLLTGF YAHIGGKGSS GVIARRFGST PSTSPVPDPS NPWAGPTDPR
301 TQARINATNP GYQTIVENNS FQDIDIYSMS AQFQHNMDWG SLTVIPSYVG ARLEGLNYAA
361 LVVPTYQKST SDQLSIEARL SSREGSPIQW VVGGFASSED VDDQYQSRIP YSPAPAFGSF
421 ALVSVSPHRD DRTWAVFGET NASVTDTLRL IAGARYTWEK KIVRGFTNPI FAPIPQFPIE
481 ETDAAFPARS SPGSISVDGQ SVDKAFNFRL GAEYDVAPRS MLYATVSTGF KAGGFYANVA
541 PDNAYAPEKL TSYQVGMKNR FFDNRLQLNV EGFYWDYKDK QESFLALLPI GNVLVTQNAG
601 KVSMYGFDAS AIVQISENDV LSGEVEYLHS KYDRYVYTYT GAPDTTVNCG TIVNGSETTR
661 DCSGYPLVRA PKWSGRVGYE RTQPLPGLGK LVFNAQMTFS SPYFVANNFS ALTRTKAYQL
721 YDASLTWASE NDRFSVTGFI KNIGNTPVYQ GGVVSASLQD ALVGMIGAPR TYGVRFRAGF
//