LOCUS BAK66527.1 767 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 TonB-dependent receptor-like protein protein.
ACCESSION AP012222-1852
PROTEIN_ID BAK66527.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_18520"
/transl_table=11
BEGIN
1 MALRSILCVA TSVIALGCAG AALAQETPQA DNVGTDDIIV TAQFRAQNLQ DTPLAITAVS
61 GDTLDARGIT SIDNVGKIAP NVNISTSSAV HGPAAAIYIR GIGQFDSNPA FEPGVGVYFD
121 DVYHGTVNGS FVDLFDIERV EVLRGPQGTL SGKNSIGGSV KIYTKKPLGS NEGYLEAGYG
181 TDNKILVRGA FDASLIKDQL FLRVSAMHQQ QDGYVDLIDY ACANPGSNVP PGPVTVKNKG
241 CKTGTLGGKN VSGIAAALRW VPADGWDVTL RTDMVRDSSQ VTGLQQVRSK DPRFISPGPF
301 KNYSNFKDFE TGEIYPNVSA VDSDGIALNI DGKLTDNLSI QSITAYRNMR ADYSNDQEGG
361 NPFSNRLNYN HMRYHQFSQE LRLSGTVGSL ADWTVGGYYF DSYNNLANRI ASSAAGVLDI
421 LNAPAFPLNN VNNNDRVDNS SKSVFGHLVV HATDSLNFVG GIRYTKDEKT YQFRQFRAWT
481 DIPAPNNGLS AEFKGDHVDY RLGVDYRFSR DLMVYAQWST GYKGGGTNPR PINPTQIVSF
541 NPEFLDSYEV GFKSDLFDRT LRLNMAAFYS KYKDIILVDS QACCGNDPAN PPAPFGIVPR
601 NAGDATIKGL EAEINWEPVD RLILTAGGGL LDFKYTSLTG LIGGPVPGAS PFITPYTAKF
661 NANAGISYGI ELGDGSILTP RIDMTHQGRM YSEANNAETS LIKAFTLFNA AIAWKSQDKT
721 WTASLNVTNL GNKTYYTSAF DATAFNGDLQ HAVARKRQVF FSIRRNF
//