LOCUS BAK66504.1 562 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative hydrolase protein.
ACCESSION AP012222-1829
PROTEIN_ID BAK66504.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_18290"
/transl_table=11
BEGIN
1 MKPIKGFPFS QSMTAICAMA AAFTLAPGSA TAQEKKAVEA VPERAGAYPA PARNGEGIGP
61 FRKMVIRGVT LIDGSGAPPR GPVDIVIENN VIADIKPAGT PGLPLKEGRE PRDFDYELDA
121 TGMFMTPGFI DMHVHGSSAD KAPDLSYSYK LWLAHGVTTV RGVDLAPFEI SLSERARSAR
181 NEIVAPRIFV YQRPGQGNGW TGGRANTPEK VREWIRWAAK QGIDGIKISA NEDQPPEVLV
241 AITDEAKKLN LGTVAHISQV GVARMSALEF GRAGLGTVTH YYGHFESMLK NGAIQNWPVD
301 YNYMDEQDRF GNVANLAAES AEPGSEQWWD YLKEQKANNV TFDPTMTIYV AGRDLMRLRN
361 ADWHDKYTMP QLWQFYQSSR VNHGSYFFDW TTEIEVKWKN FYHKFMRLLN DYKTIGGRVT
421 TGSDSGFIYQ PYGFGYIQEL ELLQEAGFNP SQVITAATLN GALTLYEPKG QPVPPIGTVR
481 VGKLADLVIL KENPLQNLKT LYGTGALRLN EQTQQLERVG GVSYTVKDGI VYDAKKLLAD
541 VADMVRAEKR RMGMPEEGLP HP
//