LOCUS BAK66503.1 1064 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 efflux pump inner membrane protein protein.
ACCESSION AP012222-1828
PROTEIN_ID BAK66503.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_18280"
/transl_table=11
BEGIN
1 MTWIVKVALQ RPLTFIVMAI LIALAGLSAI LRLPVDIFPA IRIPVIAVAW EYGNLPADEM
61 ASRIIAPFER ALTTTVNNIE HVESKSLRGK AVVKIFLHPG ADLQTATAQV TSVSQTLIKN
121 MPPGTNAPLI LNFDASTVPI LQLAVSGEGM TEQQLLDLGQ NQIRPRLVTV PGAAVPSATG
181 GKERRIEIDI DPQALQSKGL SAVDVTRAIA AQNQISPAGF VKIGANQYAV RLNNAPDSIE
241 GLNDLPVKVV NGATIYMRDV AHVLDGSAPQ ENVVHVGGNR SVLLTVLKNG ATSTLAIVEG
301 VKGMVPSILA GLPESIKVLP MGDQSLFVKA AVSGVVREGF IAAALTSLMI LLFLGSWRPT
361 VIIALSIPLA VLAAIATLAA FGQTLNVMTL GGLALAIGIL VDDATVTIEN INWHLEQGKG
421 VVRAILDGAA QITQPAFVSL LCICIAFLPM FFLPGVAGYL FAPMAMAVVF AMIASFILSR
481 TLVPTMAMYL LRPIGKGEDA HLAGQSGSRN PFVRLQRGFE HRFERVHARY GAMLATAIAG
541 RRKFILGFMG FVLASMALLP FLGSNFFPSV DSGQILMHVR APTGYRIEQT SVLFARVEQA
601 VERLLPPGEL ESMADTIGNP SSRINLVYNN SGTLGQDDGD IMIKLASGHA PTADHIATLR
661 RELPPLFPGS QFSFPPADIV SQTLNFGAPA PINIEVRGRD REANRRYALA LLRAVRTVPG
721 LVDARLDQPA NAPQLRVDID RSRIGQFGMT AQDVTSSLST ILAGTGQSAP VFFIDPSSGV
781 QYPVVAQAPE RDVASLADLR NLPMASGGGG QQTLGNVASI SRAATAPIFT TYNLQPTYNI
841 YADIQGRDLG AVAGEIQAIL DRMAPEAPKG SVVALRGQYE TMQTAFSGLG LGLVGAVVLI
901 YLLIVVNFQS WRDPFIIITA LPGALAGIVW ILFISGTTLS VPALTGAIMC MGVATANSVL
961 VVSFARERLA EGADAARAAL EAGMVRFRPV LMTALAMIIG MAPVALGMGE GGEQNAPLGR
1021 VVIGGLIVAT FATLFLVPAI FSLLHRNTPA GRRASALDLE LSHA
//