LOCUS BAK66413.1 783 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 CRISPR-associated helicase Cas3 protein.
ACCESSION AP012222-1738
PROTEIN_ID BAK66413.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_17380"
/transl_table=11
BEGIN
1 MIYAHSISSK SENTWEPLSH HLSSVSNCAE AFAERFGVGV LGRIMGALHD IGKCSAAYQH
61 YIRTPQQGDG RARGPDHSTA GAKEALRLYG VAGRLMAFGI AGHHSGLMDG PSLTERENKA
121 VEDYVGWEGQ APPLPDRRTW MASMTSPQPN AIEPAFRGFF LTRMLFSCLV DADFLETERF
181 YAVAEGRSPP ERGGRIDRRH RDAVRTYMAK YRREDTPVNT LRSQILDHAV VKAALTPGLF
241 TLTVPTGGGK TLTSLSFAIE HALRHGLERI IYVIPFTSII EQTAEVFRTA LGAGLAGDVL
301 EHHSSFDWDA RQPTEEGDEE GEGASGLAKL RRDAENWDVP IVVTTAVQFF ESLFAARTSR
361 ARKLHNLAKS VIVIDEAQSI PVHLLRPCMA AIDELAKNYG ASVVLCTATQ PALRKQDDAL
421 PRPVRAPSDA GPERTDGLDI PDERELAPDP RGLYRRLRRV RVEWSQMPVP DAAIAARFAE
481 RPQMLCIVNS RAHARELFEA IRHQPGARHL TTLMCARHRR DVLASVRADL AAGQPVRLVA
541 TSLIEAGVDV SFPEVWRAAA GLSNIAQAAG RCNRSGELGP LGEAHGRTLV FEPEMVEGRR
601 PIPRDLMPFY DAAREVLKNP ALDPLSLEGV TDYYRWLYWK KGYAALDQAK GTGSDYPILS
661 AIHETVGRGG VNCPFRTISD AFQMIDQAMD PVLIPYDADA EEALRVLVHA DRPPAGTLRT
721 LQQYVVPVPK QIRAAMLANG DAAVVREDYG DRFVRLGDMF LYDRSLGLAL STPEWRASEQ
781 NIM
//