LOCUS BAK66383.1 760 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 TonB-dependent receptor-like protein protein.
ACCESSION AP012222-1708
PROTEIN_ID BAK66383.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_17080"
/transl_table=11
BEGIN
1 MRLRHISHRA AALLATVAMS GPMPAWAQEP QVERDDPDPR ERGSARRDIV VTGQSLRTEE
61 TALPVQVLAG DELAHRRQGG LGETLAGLPG VHLDNFGGGA SRPVIRGQTL PRIEVLTDGA
121 NLFDVSSISP DHAITADPLL LDAIEIQRGP AAIHYGGNAT NGAINLIDSK VPKVVPVGGL
181 TGATEVRFGT GDEEKTLVGR VTAGLGQFAI HAEGARRRAD DYDVPDAFGT DKLRDSFADS
241 TSYAFGASWV TSKGYIGASY SRMESEYGLP GHSHINGVCH THGLDLHCEA HGGFDDPFGG
301 SDDHTAYIRL RADRVDLRAD YDDLLPGLAH VRLRGSYTDY AHDEIDGDLL FTRYTNEVWD
361 GRLELTHKPI FGFTGTLGVQ YTDGKFSGIN VEDLHVPFPD NAYGTVPPYY HLTENVGIFL
421 SERRSFGAVD VELAARKDWR RTRAARPQFL FTLTPDMEAI YDTIFRDFYG PDWKKAIEDE
481 TIESFLSRNP PVRHDPFSVS FGATWNVGNG YAASLSLAHT ERAPSVRELY ARGNNLATNS
541 YELGLAARNP LLNDAGIAPE DVLETTDAIN LTFRKTGGPL AFEVGLFYQD IEDYVFARLI
601 ETETETGVRH NFLIYTAANV RFAGIDGQIG YQLTPQSRVT IFGDYVDARL KSEDDNLPRI
661 PPGRLGVRYD LTAGPLSGDV EYYHTFEQDK IASYETRTAG YDMLNATLSY RFDLGRAKAV
721 EFYVRGTNLL NELAFAHTSF VKDQSPLRGR SVAIGMRHAF
//