LOCUS BAK66376.1 716 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 TonB-dependent receptor-like protein protein.
ACCESSION AP012222-1701
PROTEIN_ID BAK66376.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_17010"
/transl_table=11
BEGIN
1 MSVFRSILLA SVVLPAALSS VPALAQQAPL PADAGESDGA DTIIVTGRVQ RLYRAEQTTV
61 GKAAEDPMNI PQSVQVINSE LFTDQGARDA TDIYRNISGV SFFSYAGVTF RGFRQDQSFY
121 DGQRGNPFIG FSVPQLFNIE RVEVLKGPAG LFFGPGSPGG IINYVSKTPS DTSSLRMVAT
181 GGNYDRVGIS AEATGPVDAD GVITYRLGGF YEAMDPYRRN TQNKAKIADG AIAIRTNEGG
241 KLTLQATIYD NYLRANRLRG VLVDDAGNFL TDIRWNANEP TDFLHLKSQA YQARYETSVG
301 DRVTFDAGVR YFDAREAQKY HEPRGLDPAN PDLVRREFRD QIRPVHGLSF MTNATARVDL
361 FGMEHKFQAG ADWYDEKNVL DSRILRTGVT SLSLSNPVYG GAAEGDAARA ALLPFTTTDT
421 RTKRQGVYLQ DQISLTRSLL LVGGVRYDHF EDKVTTSTDG TVSNRSSYRD GDVTLRTGLI
481 FKPLPDISTY VSWSQSFEPQ AAASQDANAG GPFAPVTGNQ IEGGVKTQLL DGRLQANLAA
541 YRIVRRNILQ VDPSLPPVNG VDQLAPIGEV TSKGFEVDLA ADITPDWVLL VNYGYNDTRI
601 TGTVAGQAIT NAVGDRFANA PRHKVGFWTR YQFPGLDAAF AFGGEHVSSR ISLSGQSVQP
661 YTIFDASITK GLGFAELLLR VDNIFDKVYA ASGFSAQSGH FPGEPRTFLA ELRVRF
//