LOCUS BAK66329.1 476 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative ABC transporter substrate
binding protein protein.
ACCESSION AP012222-1654
PROTEIN_ID BAK66329.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_16540"
/transl_table=11
BEGIN
1 MLALVSCGRG RGDDSAVQVD VIGVAEQTVN PLRDSVSPAA KAILGATAQG LLAYDARGEV
61 VSALAESWIV EDGGQSYIFR LRRTSWPDGE PVKADQVVRL LQERMRANPL SLAGLSPRLR
121 AMTDRVIEIR LDAPLPVFLQ LLAQPQFAIF SRAGGTGPYR ATLANGVIAL EPMPAVTDPE
181 AEPEPAPAPI LQRSLRVHRA ALALVRYREG RTDLVLGGRF QHLPLVSAAG FEMRDLRADP
241 VTGLFGLAFV GKSDFLADLS VRDALSRTID RERLAATLGP PGWRTAVFPL PGPLDLGRQP
301 SAPGWHDRPV EERVASARRV IEAWRAAHDD SDPPVLRIAL PEGPGGSVLF IALARDLGQL
361 GVRLDRVALD ASADLRLIDE VAPFDSALWY LSRLDCPARI ACDPRATKLL SGAREASDPA
421 EQARLLAEAE ALIVAHAGYI PLGQPVRWAM AARRLTGFQP SPRGIHPLNR LIAIPN
//