LOCUS BAK66289.1 644 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 cytochrome c-type biogenesis protein
CcmF protein.
ACCESSION AP012222-1614
PROTEIN_ID BAK66289.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /gene="ccmF"
/locus_tag="SLG_16140"
/transl_table=11
BEGIN
1 MIAETGLAAL WLAATLAGVQ LLLAWAAVAR GNEEARRLIR PVAVAQGVLA CLAMALLILL
61 FLRSDMSVYL VAANSHSMKP FIYKFAGAWG NHEGSMLLWV AVMSASGAAV ALFERALDRA
121 THYATLGAQA AISLGFYAFL LLASNPFTRL DPPAVQGQGL NPLLQDPGLA FHPPTLYFGY
181 VGLSVAFSFA VGALLTHQVN ARFARAVRPW VLGAWVLLTF GITAGSYWAY YELGWGGWWF
241 WDPVENASLM PWLAATALLH SASVLAARDA LRAWTVMLSV VAFAMSMIGT FLVRSGILTS
301 VHAFAVDPTR GSFILALLGL YIGGALVLFA LRVHTVNEGA RFEPVSREAA LVVNNLLLCV
361 ILGLVLVGTL YPLLTEMMGV RVSVGPPYFN AVIGPVALLL MALLVVGPLL RWRRDDAGAV
421 LRRALPAVGL GVLALIAAVA LPSPPIGWLP TLGLGLAAAV ALASLAPLWK RNLLRTPLFT
481 YGMVIAHLGC AVSLAGMASE SAFSVERLAA AKPGDRFEIA GQTVRFDSVM PVAGPNWTAM
541 EATLTVSRGN RVIGVARPQA RFFADPPTPT NESVQMTRWN GQLYLVLGEQ LEDGRWQLRI
601 WWKPFVTLIW AGGGMIALGG LLALVGRVRR ERRQGRAQAR EVTA
//