LOCUS BAK66280.1 542 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative dehydrogenase/oxidoreductase
protein.
ACCESSION AP012222-1605
PROTEIN_ID BAK66280.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_16050"
/transl_table=11
BEGIN
1 MSRRYDAIVI GAGHNGLVCA YYLARAGLSV RIVERRGVVG GAAVTEEFHP GFRNSVASYT
61 VGLLQPRVIA DMGLVARGYR VVERPISNFL PQEDGRYLKV GGGLARTQAE FGKFSASDAA
121 ALPGYQAMLE GVAQVMRDMA LRPPPNVGGG WRALVDAAVQ GRRLSGLGLV RRRDLLALFT
181 RSARDILDEW FDSDAVKAAF GFDSVVGNYA SPDTPGSAYV LLHHVFGEVN GHKGAWGHVI
241 GGMGRITQLM AEACREAGVE ISVESPVERV LVESDGRGGE RIAGVRLEGG AEIAARRVIS
301 NAGPALLYNR LMDPGDLPPD FARRMKRFRT ASGTFRMNVA LSALPRFAAL PEEGEHHRSG
361 IILAPTLDYM DRAFADARTH GWARRPIVEM LIPSTVDDSL APPGAHVASL FCQQFAPVLP
421 DGRRWDDPAE EQGAIDAIFG VIEAFAPGFR ASVLGHDALS PLGLERRLGL VGGDIMHGVM
481 SLDQLWAARP VLGHGHYRGP VRGLYMCGAG THPGGGVTGA PGHNCAREVL RDGRMRRWPV
541 GV
//