LOCUS BAK66269.1 432 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative polysaccharide transporter protein.
ACCESSION AP012222-1594
PROTEIN_ID BAK66269.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_15940"
/transl_table=11
BEGIN
1 MTVETLVRTI RRNLLILLGG TGSATLITFA TVWLNARALG AEGLGVLTLI QAYVAFLGGF
61 VSFGTQQSCI RLCTQAMSDG LPERLNIVTG IAIALDLLAG AVGGIIALIA LPWFVSLNPA
121 LTPYLHYLLA YTLTVFLSGI SAMNGVFRLF DAFGKVSLLQ VIGATLNLIV SAVFYMNDAP
181 LEHYLVAFAA NLALTNLLHF FLGFRLLRRN GVLPSFRLGD LQRSPMMAEF IRYSWTTWGT
241 STINSLRTRM DVFVLGYFWS TAVVGVYGVL RQVVGPMSKV IAAISSATFT ETSRLAATRD
301 LVRARALLTR LALMGLVPGS VIILGTWLLG SFLLGLAFGP EFAAGGPALL VLVLGSTIML
361 SAATFGGFVQ AFISPTRLLE IYLWAIGAFL LTLIVAVPSL GMVGAAMAQV ISAAIIWGAS
421 WLVLRACFRS AA
//