LOCUS BAK66250.1 664 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 DNA topoisomerase IV subunit B protein.
ACCESSION AP012222-1575
PROTEIN_ID BAK66250.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="5.99.1.-"
/gene="parE"
/locus_tag="SLG_15750"
/transl_table=11
BEGIN
1 MSDDLFGGQG ARTPETYDAS AIEVLEGLEP VRRRPGMYIG GTDERALHHL ASEVLDNAMD
61 EAVAGHATRI EVTLGAGNRL TISDNGRGIP VDPHPKFPGK SALEVILTTL HSGGKFSDKA
121 YATSGGLHGV GISVVNALSV DTEIEVARAR ELYRQRFSRG LPLGPLEKVG AAPNRRGTTV
181 SFTPDSEIFH ELKFKPARLY RLARSKAYLF AGVEIRWKCD PILITDDTPV EAVFQFPGGL
241 SDHLREQLGT RECATAEFFR GMQEFPEGPN GLSLGRVEWA VAWPLWSDGS TSWYCNTIPT
301 PDGGTHEAGL RAALTRGIRA FGELVGQKKA KDIQTDDIMS GCELMLSVFI RDPQFQSQTK
361 DRLTSPEATR LVEAAMRDHF DHFLTDNMDR GKALLGHVLE RMDERLRRRQ EKEIKRKTAT
421 SGRRLRLPGK LTDCSSDDPE GTELFIVEGD SAGGSAKQAR DRKTQAILPI RGKILNVASA
481 TSAKILANQE IADLIQAIGC GTRKDCNPDN LRYERIVIMT DADVDGAHIA TLLMTFFFQE
541 MPDLVKRGHL YLAQPPLYRL VSGGKSVYAA DDAAREALIA GPLRGKKVEV SRFKGLGEMN
601 PQQLRETTMD PAKRSLIRIT LPQEYEERAG VKDLVDRLMG TNPAHRFAFI QENAAQVDED
661 VIDA
//