LOCUS BAK66194.1 782 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative two-component system hybrid
sensor and regulator protein.
ACCESSION AP012222-1519
PROTEIN_ID BAK66194.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_15190"
/transl_table=11
BEGIN
1 MNPVPVIVAA AFVSALLLLW LLGDVVLAAG FGAAVIGGAA LIWYAQRLFP SAQVDQAVVT
61 DWTVTRAAAE AAGHAIAVTD RTGRMVCASD QYGEWFPGYP VPAEIKVSAR DQDRLAQAAR
121 AAWRDGEAEV SGLLRGSLQL DVHVLRTGRI DDYLLWRFAS VRQASVMDDY LRIIEGQAGR
181 QLSEAGIMCV MIGGEGRIRA ANPAFTLRAT GRPDSNIIGR DFSAYMRVDA KGRIFYAQEE
241 QQATPVRMMQ IPVRPEDPAG LLVLVMVDDN VPSVEGISSL AYVETLLSLL PFGLGMADRD
301 GRLLFYNNAF ARAAGIGPGD KPSYPGDLVI GEDQAAVAEA IRRYAIGPQM SGDLQVRLRG
361 APEESVSLSL AGVRGLGEAA VLLSLKDNSE ETRLKRQVAQ QTKMQAVGQL AGGVAHDFNN
421 ILTAIIGHCD LMLMRHTPGD SDYDDIQQVK ANSNRAASLT RQLLAFSRQQ TLRPQVLQLP
481 DVVSEVSSLL KRLLGENIKL EVYHGRGLGT VRADPGQLEQ VIVNLVVNAR DAMPDGGTVT
541 VRTFAVSAQD VRDLKNEIMP IGDYTGLSIG DTGVGIAPDL LGKIFEPFYT TKPVGRGTGL
601 GLSTVYGIIK QSGGFIFPES QLGEGTVFKI YLPVHATSAE VGGSTAVTRK RPATETWGTG
661 TILLVEDEDM VRSVAERALT RQGYTVVSAS DGEQGLARLA QTEKVDLLIS DVVMPGMDGP
721 AMVRAARASY PDIPVLFMSG YAEEQLRKSI DIDNVAFLPK PFSVSQLAEA ARDVLAAARA
781 AG
//