LOCUS BAK66190.1 672 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative lytic transglycosylase protein.
ACCESSION AP012222-1515
PROTEIN_ID BAK66190.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="3.2.1.-"
/locus_tag="SLG_15150"
/transl_table=11
BEGIN
1 MYRMGKDLRL PAIVIAAALA SGATSASAPQ SATTVTWEAV RERIAANSAS DAQITSAIGE
61 WRRLASSDAL GFAAYADFLL GYPGWPDEGR LRGNAERLAD PDMDDPGKII RFFERYPATT
121 AQGKAVHALA LARLARFEDA RGVARAAWIA GPMDPKYEEK LRGQFFSVFT ADDHLKRADA
181 ALWRRRADVA ERVLPSVPVT RQAVVAARIA FQRKAADAAL KMGPADPVGA MDAGYLADKA
241 RWMAENGDSA GVRTLLANRM TLMQRPGDAE RWYELLLAHA RAAGSDSQWS NAYAIASKVD
301 DAFEPGTDVS AQPLGVRDDY TSLVWLAGTA ALNKLGRPAD AEGMFVRYAT GARSPQTVSK
361 GYYWAGRAAA AAGRQSVANE HFARAAAFPD QYYGQLALER QGKAIPAPPA AERRVEIAAA
421 QRKAFLSRPI VQATLKLGRD GAWMEQSRFV RALASTAETD EDHVLVAELS QMLGRPDLGV
481 MVGRRAMANG LSGYADASFP RMKVPDRQQM NWTMIHAITR QESQFDRAII SRAGARGLMQ
541 LMPATAREVA GKIGMSYDTG SLFEPHYNIE LGSTYFSQLL RYYGGSYPLA VAAYNGGMGN
601 VNKWLKANGD PRLPGADIVQ WIEDIPIYET RNYVQRVLEN AVIYDLVNPT RQMASSSSSA
661 PLSRYLGKQR PG
//