LOCUS BAK66032.1 756 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 DNA helicase II protein.
ACCESSION AP012222-1357
PROTEIN_ID BAK66032.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="3.6.1.-"
/gene="uvrD"
/locus_tag="SLG_13570"
/transl_table=11
BEGIN
1 MTVPSPSPAD PPYLQGLNEP QREAVLTTEG PVLVLAGAGT GKTAALTARL AHLVATRRAF
61 PSEILAVTFT NKAAREMRER VGRMIGPAVE GMPWLGTFHS IGARMLRRHA ELVGLQSNFT
121 ILDTDDQLRL MKQIIQAAGI DEKRWTARAL AALIDRWKNK GFTPKDVDAG ESEAFANGKG
181 AEIYAAYQDR LRALNACDFG DLLLHMLTLF RTDREVLEQY QQRFRYIMVD EYQDTNTSQY
241 LWLRLLAQTR KNICCVGDDD QSIYSWRGAE VANILRFERD FPGAAIIRLE QNYRSTPHIL
301 AAASGVIAQN GGRLGKTLWT QADEGEKLRV IGVWDGPEEA RRVGDEIEGL ERQGVRADDI
361 AILVRAQFQT REFEDRFIQI GMPYRIVGGY RFYERAEIRD ALAYLRLVNQ PADDLAFERI
421 VNVPKRGLGD KAVEKVHRLA RAEGVPLSLA AARIVDSDEL TPQARRALGR FIGDLARWRD
481 LATTMNHADL ARQILDESGY TAVLQAERST EASGRLENLQ ELARAMEDYE TLGAFLEHVS
541 LVMDNEGAQE EAKVTIMTIH AAKGLEFDTV FLAGWEDGLF PSQRSLDEGG LSALEEERRL
601 AYVAITRARR RCYILHAANR RVYGQWTSSI PSRFIGELPK ETTDVETTMS GGASLWRANW
661 SERDDPFANV ARGSGRGPGW QRAQGQFTRE PTRIVEARQS AVSLGNKGRD DISVGMRIFH
721 QKFGYGRVTA IEGNKLEIDF EQAGAKRVLD SFVSLA
//