LOCUS BAK65927.1 341 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 4-oxalomesaconate hydratase protein.
ACCESSION AP012222-1252
PROTEIN_ID BAK65927.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="4.2.1.83"
/gene="ligJ"
/locus_tag="SLG_12520"
/transl_table=11
BEGIN
1 MMMIIDCHGH YTVLPKAHDE WREQQKAAFK AGQPAPPYPE ISDDEIRETI EANQLRLIKE
61 RGADMTIFSP RASAMAPHVG DQSVAVPWAQ ACNNLIARVV DLFPETFAGV CMLPQSPEAD
121 MTSSIAELER CVNELGFIGC NLNPDPGGGH FKHPPLTDRF WYPFYEKMVE LDVPAMIHVS
181 GSCNPAMHAT GAYYLAADTI AFMQLLQGNL FADFPTLRFI IPHGGGAVPY HWGRFRGLAD
241 MLKQPSLDTL LMNNVFFDTC VYHQPGINLL ADVIDNKNIL FGSEMVGAVR GIDPTTGHYF
301 DDTKRYIDAL DISDQERHAI FEGNTRRVFP RLDAKLKARG L
//