LOCUS BAK65905.1 611 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative ABC transporter protein.
ACCESSION AP012222-1230
PROTEIN_ID BAK65905.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_12300"
/transl_table=11
BEGIN
1 MARPPRACII VMTNPRATRR ADAIRLGLGF TFRHWARHKG WVAFIMVVLV ISTAAEMLVP
61 LFAGRLTDAL QKGVAGRAEA LQAFLAMTAL ALGPVVFGRA AIFGIIGLTL RVMQDIGNEA
121 FQRVQRFSTD WHANSFSGSV VRKITRGMWA LDLLDDVLLL GLFPALLVLG GTMALLAWHW
181 PVLGLAMALG SAVYIGFVVW FSTRIVAPAA TLSNRWDTAL GGMLADSIGA NSVVKGFGAE
241 QREDARVAQV VGKWRQRTRR TWIFGTVGNA VQTALLWMVR ATVTGGALWL WWRGEATTGD
301 IIYVLTTYLV IHGYLRDIGQ HVTHLQRSVN DMEELVRMHD EPLGIEDRAG AQPIRVERGE
361 IRFDRVTFRY GGHEKPLYEA LDITIPAGQR VGLVGRSGSG KTTFVKLVQR LYDVTDGRVL
421 IDGQDVRAVT QASLRRNIAI VAQEPILFHR TLAENIAYGR PDATMADIEW AAELANAHGF
481 VARLPRGYRT LVGERGVKLS GGERQRVALA RAFLADAPIL ILDEATSSLD SESEVLIQDA
541 IQRLMAGRTA IVIAHRLSTV RALDRIVVFD AGRIVEDGTH EALLRLEGGQ YRRLFEHQSG
601 AAEPVLIGEA G
//