LOCUS BAK65894.1 487 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 succinate-semialdehyde dehydrogenase
[NADP+] protein.
ACCESSION AP012222-1219
PROTEIN_ID BAK65894.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="1.2.1.16"
/gene="gabD"
/locus_tag="SLG_12190"
/transl_table=11
BEGIN
1 MDQSQRNAVI AYKPLLRAAA YVDGQWVDGA AGRTIEVTDP FTGGLITTIP ALEQAQVQAA
61 IDAAARAFPA WARTPARERG KILRRLLDLI MAHRDDLARL ITLENGKPLK EAYGEVDYGA
121 GFVEVYAEEA PRALGEIIPA PVPGRKLYAE REPVGVSVAI TPWNFPLAML TRKFAPALAA
181 GCTMVAKPAS QTPLAALALA QLAEEAGVPP GVFSVVTGSA GMIGDLFTSS PIVRKLSFTG
241 STEVGVKLMA ACAPTVKRLS MELGGNAPML IFDDADLATA VDAAMIAKFR NCGQSCIAAN
301 RIYVQRGIYD AFVESFAQRV AAMKLGDGLE EDTDIGPLID APAVAKVNEH LEDALSGGGR
361 LLVGGKGEGR MQPPTLVVDV APGALLTREE TFGPLAGLVA FDGYEDAIRL ANDTPFGLAS
421 YVCSTSSTTI AHASRDIESG MVGVNTGLIS TPYAPFGGVK LSGIGKEGSS HGLDEYLNIK
481 YVCHAGL
//