LOCUS BAK65875.1 1399 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 hypothetical protein protein.
ACCESSION AP012222-1200
PROTEIN_ID BAK65875.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingomonadaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194, 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_12000"
/transl_table=11
BEGIN
1 MAGEPDQPPP PETSGETAAA PAPPRKRPWL GMALLLALVA LMLGLWGGMR WIDSPPGHRF
61 LIRQIEGLRP ASGLRIEVGA IEGRLFGAMV LRDVRFHDPQ GRFARVARAD LDWYPFGWLS
121 NRLDIDRLRI HSADLDRLPR FNPSTKRGSI LPGFDIRLGD LQIDRLGIGA SISGTRRTLR
181 AIGKADIRSG RAVIDLLAAS ADTADVVRIA LDSRPDDRRF DIDAVVYGPR GGIITGLLGT
241 QRSAALTIRG DGDWERWRGR LIALDGGALV TNLALSVQDG RYLARGPLAL VGPLASLRSL
301 APQGNALLDA DLTFERRVAR GTASLQVAAL RLGVAGGVDL GRNRFDDLRL EAAVDQPGRL
361 AAGVTGKPLL LRARLAGPFD DIALDYLLTT PELRRGKTAI LDLRASGKAR LTGARGSIPI
421 RLTARSLALG LQPLDERLRN LVAEGRILRD GNALRLAPTA IRANGFTGQL DGAADLGEGR
481 YAANLRAGFE GLEIRGLGRL DLAAVLRLDR PPRGQASFGG TARAAMRRMD NGFLLGLAEG
541 LPVLTSNLAI APDGAIALRG LRLAAPGLTL AGNATVDGRG MLRFTGEGEH RAYGPLQLTL
601 TGDPSRPEVD VLLARPLPAL RLANVQAHLV PDAQGYAVSV AGGSMLGAFK GEGAILLPPD
661 GQARIMLANL GVSDVVVHGE LVPVSGGLEG ALALSGPAEG KIALSMVDSV QKVALDVDLG
721 GARFTGSPAI TVNRGHVSAE MLLKPGAVTI TGEAQGRGVR IGTLAIGRVA GSLNLVNGEG
781 TATVSLNGRN GRLFQLQSRA SIATDRIGVD LEGSIDQRPL RLDRTAVFTR EADGWRLAPT
841 SLRLQDGSLR LAGFMGAEAT HVDARAQGLP MALLDLANSD LGLGGTADGT LAFDWPRGGV
901 PSGRLNLRVK GLTRSGLALS SAPVDIGLNA ELNSQRLAAR ALLARGGKVV GRGQALVTPL
961 GEGSLSQRLF HAPLRAQLRY GGDADTLWRL TNVEIVSLGG ELRLVANAGG TLSDPQIEGT
1021 LTTRDGRIQS PVTGMTLTGV AARGTFAGSR LTIGELSGRT SGGGSVTGTA AFDISAERGI
1081 GMDIDLRTER AEILNRDDVG ARVTGPLRIR SSGNGGVISG DLDVVSSRFM LGRASSVAEI
1141 PQIRLVELNR SGEEVERTRA IAPWRLDVRA RAANGLTVEG LGMQSEWSAD LTIGGLVTAP
1201 AFKGMANLIR GTYDFAGKRF DLEEGRLTFQ GATPVNPTLD IRATADVQDL SATITVTGSS
1261 LRPIITFSST PAMTQDELLS RLLFGTSITN LSAPEALQLA SAVAAFQGEG GGLDPINAVR
1321 RATGLSRLRI LPADTTTGQG TSIAAGKNIG RDLYVELISD GQGYSATRIE YQITRWLSLL
1381 SSVSTIGRQS VSARVSKDY
//