LOCUS BAK65859.1 888 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 peptidase M14 family protein protein.
ACCESSION AP012222-1184
PROTEIN_ID BAK65859.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_11840"
/transl_table=11
BEGIN
1 MEIPMKPIIQ KAARALMLSG STLALHAAVI GGMVAATVVP VSHAAAQTAV PTPESWFGHR
61 MGTDRKLEPY AKMVAYYQEL AKTSDRIKLV ELGKSTEGRP FLALYISSPA NLARLEEYRQ
121 MNLKLTDPRG VSQDELDRIV KDGKAVVVQS YDLHSSEIAA SLTSVEFTYD MATRTDPEMM
181 NVLDKVITII MPSLNPDGHD MVQDWYMKYV GTPYEGGALP WLYQKYVGHD NNRDAFMLNM
241 AESRHLASIL YRDWTPQAYI DHHQMGQYAP RISIPPYTDP IRPFGDPLVW REMTFFGAAM
301 AYELDAADLS GGIGDAIYSG WGHFGFHWIT PFHNIAGMLD ESASANLATP LYVHPDQLKG
361 GQRNVPDNKA QMNMPNPWPG GWWRVRDIVD RQKVTSWALV DAAAKNKEMV LRNMYTKALR
421 QTRRGAEGET KAYVIDVKQH DPLTATKMVN ALLAQKVDVY RAPAPFTHEG HIYEAGTFVV
481 PMDQPKMGLV RWLLGQTFFP DDSYARTKDG TPIRPYDMST DAMTEFMGVE STPVATPVAI
541 AGLERLGAAI APRGTVEGSG PYLLDAALND SFHAVNLLLK GGATVQRVTT ASGAAKVGDF
601 LVSGVSGATA ESIAASTGVN FTAAGSAPAG SAIAVKAPRI AMLKRYRGGN MDEGWTRFVF
661 ESYDYGYTSI MDAEIKAGNL IKKYDVIVLP DDSLGAMTGD ASDMGGRPGG RDNLEGVPPE
721 YHSGFGDAGV KALEEFVKAG GKLVTFAQAG DLPIKKFGLP VANVVAGKSS KEFWSPGSTF
781 RMNVDTSDPR AYGMPDKALA IFTAGCQAYE VIPRIRNENV KVIASYTDKD VLQSGWLLGE
841 EVIAGKAAMV SVKHGKGDVI LIGFRPQHRS QAHGTYKLLF DSLLAPVS
//