LOCUS BAK65837.1 861 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 translation initiation factor IF-2 protein.
ACCESSION AP012222-1162
PROTEIN_ID BAK65837.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /gene="infB"
/locus_tag="SLG_11620"
/transl_table=11
BEGIN
1 MSDNREDKPT LGRKPLGLKR TVEAGQVQQS FSHGRKNTVV VEVKRRRVIG KPGEAEGARP
61 APAPEPAAAP PPPPRPQAPR PAAPPPPRQS STDSLLTRQE MQAKLLREAE EARMTALEEA
121 RRREEAERLA ASEEEKRRAE ENRRAEEEAE RARQAAAESK AAEPETPATP AEAPAAATTP
181 AAASAPDQQA PAASGTAQQE ERPAARRFTP VAAPKRPEPP KQDRNKRGDD RRQAGKLTVN
241 RALADDDSAR ARSLAALRRA REKERRAHTP GNSQPREKQS RDVIVPEAIT VQELANRMAE
301 KGADLVKSLF KLGMMVTVNQ TIDQDTAELL VEEFGHRIQR VSDSDIEIDT AGDIDAPETL
361 QPRPPVVTIM GHVDHGKTSL LDALRGTDVV AGEAGGITQH IGAYQVKTKG GDIITFLDTP
421 GHEAFTEMRA RGANVTDIVI LVVAADDGLM PQTIEAINHT KAAGVPMIVA INKVDKHDAN
481 PQRIRERLLE HEVIVEEMGG DTQDVEVSAL KKTGLDDLID KIMLQAELLE LKANPDRPAE
541 GTVVEAQLDK GRGPVATILV GRGTLKVGDI FVVGEQSGKV RAMVNDKGQQ VKEAGPSSPV
601 EVLGLSGVPM AGDQLSVVEN EARAREVAAY RQELALRKRT TAAPTSFEHM FSALNTQVIE
661 YPVVVKGDVQ GTVEAIISAL NRASTDEIKV RVLHSGVGAI TESDVTLAAA SRAPLIGFNV
721 RPNAKARTLA ERDKVSLRYY DVIYDLIEEV KSEMSGQLAP ERIETVIGKA EVLQVFPAGK
781 KDKAAGLLVL DGVIRKGINA RLTRDDVIVS ATTIASLRRF KDDVSEVRAG MECGAVLHDT
841 NDIKAGDMLE LFEVEERARV L
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