LOCUS BAK65805.1 491 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative dioxygenase protein.
ACCESSION AP012222-1130
PROTEIN_ID BAK65805.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_11300"
/transl_table=11
BEGIN
1 MTTFPDVPAF TGFNTPSRVE ANVEDLNVHG QIPPEMDGAF YRVQPEHQFP PKLGNDIAFN
61 GDGMISMFRF RNGKVNFTQR WAKTDKWKLE NEAGRALFGA YRNPLTDDET VKGKIRGTAN
121 TNAYIHGGRL YALKEDSPPL VMDSITLETQ GYIDFHGKMK GETFSAHPKT DPATGNLCSF
181 GYASKGVLTR DMTYYEISPD GELLYDVWFE TPYYCMMHDF AITPDYALFS VMPMTSSWER
241 LAAGKPHFGF DTSLPTYLAV MPRKPGTTAD DIRWFKGGNC FTAHVMNAFQ EGSKIHLDLP
301 VAANNMMPFF PDINDAPFDP VAGATYLTRW TVDMNQNDED YKSVRLSEMI GEFPKIDDRF
361 TGQKNRYGWM VVIDPSQPVE MKGGSAGGWV MNTLGFVDLE TGAEQKWWCG PVSSIQEPCF
421 VPRSPDAPEG DGWIVMVCNR LEERGSDLLI FEATNIAGGP IATINIPVRL RFGLHGNWAD
481 ADRIRPLERA A
//