LOCUS BAK65804.1 777 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 TonB-dependent receptor-like protein protein.
ACCESSION AP012222-1129
PROTEIN_ID BAK65804.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_11290"
/transl_table=11
BEGIN
1 MMKQQTRVVR LMAGAALCAM TMPMQLHAQE APDEAAGAND ASTEEIVVTA QFRRESAQKT
61 AISIDVLSAD KLQQAGVSQA TDIARLSPGV QITQGGSALQ VYIRGAGDFS TTGYSNSAVA
121 QAYDGVFAAR TQYVAGTFFD LERVEVLKGP QGTLYGRNST GGAINIIPVE PRIGTFEGYV
181 SAGFQNYNGF NAEGAINIPI GTSSALRASF QGVSREGYIS DGTDDDKHHS FRLQFKTEPS
241 ADVTLRLGLN YQHLGGRGPG KVVYEPTAPN APGITNPQPI IPDDRWTSID ESLNALIGRV
301 TAPPGIYPLD TSQVYQNITI WGVNAHLDWN LGPATLTVIP AYQRVETDSL VMPALYFNTV
361 NEFTGAPSTS DAKTLEIRLG NANDKLKWVV GGYYFREDQD SYNSVRLGFA SDTAFVADLS
421 TEAYAAFGEL TYSLTDALRL TGGLRYTDEK KSVDGHRYAL FGSAGCTTPG TGPQNSCEIL
481 TSAGTNVQGT YSVNKLNFKA GAEFDAGPDS MLYASVATGF KSGGQSNADI DPYKPEEVTA
541 YTLGAKNRFF NRLVQFNAEL FYMDYRDRQE NFTSLDRGGA QVSSLFNAGK AVAKGASIDL
601 TLFPSRNDQF RVAVEYVDSE YKEFSYRNYR AANPSARTSC DVTPVAGGTT QIGFWTIDCT
661 GFQLPRTPTW SGTVSYTHTF DLANGAAIEF SPDMSFASSR WLAAEFVENA RADAYALFNA
721 SLTYRAPDNG YSVQLFVRNI GNEAVYTGTQ QYPFINNYNG QDIAPPRTYG ARFRVRF
//