LOCUS BAK65761.1 709 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 TonB-dependent receptor-like protein protein.
ACCESSION AP012222-1086
PROTEIN_ID BAK65761.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_10860"
/transl_table=11
BEGIN
1 MQKLIAPILS LPLVLVPVIA PCARAAEATA SDEEATEDAR KAILVYGHRS DEDQTRAASN
61 GAMGTKTLLD TPYSITLVDQ ADIARRQVTS IGQVFQNDPS VYSSAPSGSI NWWGTQIRGL
121 GVRNYYIDDV PLLLYWGGDF PLEPIESVSA LKGLTGFMYG IGAPGGVIVY RTKRPTAEAM
181 LTTEAGYRTN SVFYAKADAG GPLTQDGRLG YRLNLAGEKG TAYNRAGVNR FVASLALDYA
241 FTPDLKWYAS ATYEDSNLKH EPFQFYWEEY VGTKLPRPTY DYDKLNVANS FYKARTLATA
301 TGFDWSFAPG WSARLTYGYT SKRHHSNKMF VYMQNSDGEY DGYAYNFAEL DRNHFAQFLL
361 QGEVTTGSIR HEIVAGASYL ATDSLFGFND RNYYWGNDFN GSIYQDQPFR VTRTMYFDTE
421 GWPTKERQSG VFASDTVHFG EHVQAIVGAR YTRYKLLDAD GDPRVDSSYR TSSVTPTFAL
481 IYKPAPYVSF YGSYAEAMEP GSRVGGEYAN AGEVLKPTRS RQYEIGAKYE HQGLSMTLAG
541 FRIERAATID QIVDGTRRLT QDGLTLYKGV EAIASYRFAP DLKLGLGVLR LDPSIRNVSA
601 GNETLQGNTP GGASKWQLTG NAQYDIPAVP GLSVHGNVRY IGKAPTNDAN SLIIPSYTVA
661 NAGFQYETLV GNRKVTFMGN LNNLLNEKYW TQTNIGEGVN GALGVRIAW
//