LOCUS BAK65716.1 703 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 glycogen debranching enzyme protein.
ACCESSION AP012222-1041
PROTEIN_ID BAK65716.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="3.2.1.-"
/gene="glgX"
/locus_tag="SLG_10410"
/transl_table=11
BEGIN
1 MTFAFAKPDR LHHELGAEFT GEGTHFAVFS ENAEAIELCL FSPDGSEELQ RLELPHREGS
61 ILSGYLPGVR PGQLYGYRAH GAYAPEEGHR FNPNKLLLDP YAREVAGQIR WDDALWGYDL
121 QSGDDLTFDE RDSAPFMVKS VVQDPDFDWE DDKAIRRSWT ESVIYEAHVR GLTMVHPDVP
181 EELRGTYAGM VSDPILDHLR KLGVTAIELL PCQFFLDDRA LVDRGLSNYW GYQTLGYFAP
241 EPRFLQQRDG APSAIRQFKN MVKRFHRAGI EVIMDVVYNH TAEGSERGPT LCFRGLDNAA
301 YYALSPENPR YSFDQTGTGN TLSVAHPMVL RMVLDSLRYW VQVMHVDGFR FDLASTLGRQ
361 AAGFDREGTF FGAIRQDPIL AGVKLIAEPW DVGEGGYQVG GFPHPFREWN DKFRDTVRGF
421 WRGDEGMVGD LAGNLLGSPV QFNHSDRGAT SSINFLAAHD GFTLMDTVSF NDRHNEANGE
481 DGADGHDNNV SDNMGAEGET EDEAIIAARA RRRRNMIATL FLSQGVPMLL AGDEIGHSQG
541 GNNNVYCQDN ETAWIDWNRR DDAFLDFVSN MIAFRRDHPV LSQDMFLLGE STEEHRIEIA
601 WHQPDGREMD EELWGQAGLR VLGLFVDHSA RAPFVENENI SALFIVLNAG DGLDFTLPTP
661 NGVTGWVRVV DTARDEAFAP EPCPGDTVAI EPASVCVFAP AQP
//