LOCUS BAK65704.1 1395 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 hypothetical protein protein.
ACCESSION AP012222-1029
PROTEIN_ID BAK65704.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_10290"
/transl_table=11
BEGIN
1 MKFAFVVQNL AQVSDSVGYD CIYQYKTIRE LYPTDGGVRI FSEVFDRRIH CDIDIEPMKD
61 FWEAVAAYPD ACIIYHFCDG WTEIDEFLRE TARNAVIRWH NNTPPWFYIR DNVDFAADCN
121 RGYDIISRFA HAGSVRFMVN SEFTRRQLHA LGGLDSLINT VFPASTFLLK DRRDNRAALP
181 QSADRPIELL FVGRVVQHKG HRHILSVAAV VQRFCERPVR VLFAGALEAR LQNYWLELTD
241 IGVRLGVETV FLGLVSDADL AELYASCDAF ICMSEHEGFG MPVFEAMRSH VPVIAWSTSA
301 MADLLKGHPF ASSEFSLHRF AACVIAAMEP SIRQRVIALQ QYVLEGYTDA TVRSQLCAAI
361 ARAEDLGLDP ISDAPAVPDI DDIATFVSNL TEWIEQEIGT SVEVFIHDAP VNYVSLYDIA
421 IHDRLIRAVY FDRQARGARA RSDHFDELHP FHSIIRHAML GEAIADVNPP RDLETLLSFD
481 DEVFVRLAYW ALLGREVDSG GLSIYLRRIR KGEDKLRLLR ELASSAEGRK HGGRLGKAVL
541 AAGQPSDIVR LQQMETTIGR LQRFLAPEVG GPPPHDPLGS IRHVDDLLQL NTPSFIDMSY
601 RILLGHAVEA GRMDRDLAAL RQGQSRHAFL SALRRSLTEQ DQIGSLEGLS AYLAAPEDGA
661 DPVSIRVARL SNELGRLTNQ LALWDQAPSG VHAQEPDRAL LRLTEQAVRT SSSPSMESLR
721 ALSLERAAGR REAVTQSAGL CPAETQAGPG EIEIHHIHQI LINDEDRIPD ELPDIVQRNR
781 DSLRRFYPEA EYRLWGADDL RQFIAAHFEP AVVEGFDILQ AYALKADLGR YCLLYVFGGL
841 YSDLSNRFLS RWRIAEGKTI ACFREHKPLH GAVWMLQNTL IYASPGQPEL RLAIDLVLEN
901 IRNREYGVSS LAPTGPILFG RAMAAVGQAS SYQIGDAINL PVEGGLNRAN YVDRDGTLVA
961 ARLQGNGGCL SELGLQKTNV YGEMWSRREI YGEGLLLFAH DNPAVETAEP RDIAGIVLGT
1021 QGKERGISIR KIALPRGQYR ITARFLVKDR PGAIGLAVDS DGGTRQIVRG KAVLPDDCGD
1081 VGVAVTLDEA MTVDVHIRVG HAFHGLFKRL MVRGVSQHDS DVTLTETEAS GVHAPEARSV
1141 TVQPVSHIHH IAYHPAVLAL ADESEIAENI RLAAALHDGA RQMVWTEASL REFIASRFNA
1201 DVVWAYDCLP QFMNRSELGR YCLLYALGGL YVDPWLRMVS PIGVAYGKQL TCFRSAEVED
1261 GASWSIDTSL LHAEPGRAEF EQLIDQIVEG VRGGDYGAIP TAVTGAERLG RGLAISYDAR
1321 RYFGGEIVPM TRGRPIVNDC FVSQDGRLIA VCKGSDNPIT RMRQEVRAAW LEGRIYAHVE
1381 GPHLPRRAPL VQTLG
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