LOCUS BAK65693.1 378 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 GDP-mannose 4,6-dehydratase protein.
ACCESSION AP012222-1018
PROTEIN_ID BAK65693.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="4.2.1.47"
/gene="gmd"
/locus_tag="SLG_10180"
/transl_table=11
BEGIN
1 MTSNTTGGKV ALITGVTGQD GSYLAEFLIE KGYEVHGIKR RASSFNTQRI DHIYADPHAE
61 SAHLKLHYGD LSDTSNLTRI LQDVQPDEVY NLGAQSHVAV SFEAPEYTAD VDAVGTLRLL
121 EAIRFLGLEK TRFYQASTSE LYGLVQEIPQ RETTPFYPRS PYAVAKLYAY WITVNYREAY
181 GMYACNGVLF NHESPRRGET FVTRKITRGL ANISQGLEEC LFMGNIDSLR DWGHARDYVR
241 MQWMMLQQET PEDFVIATGR QYSVREFITW SAAELGICLR FAGEGVDEVG IVETVREPRE
301 CSVRPGDVIV RIDPRYFRPA EVETLLGDPT NAKEKLGWVP EISAQQMCAE MVAADLKVAK
361 RHALLKAHGY DIPVSVEN
//