LOCUS BAK65686.1 379 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 putative capsule polysaccharide
export outer membrane protein precursor protein.
ACCESSION AP012222-1011
PROTEIN_ID BAK65686.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_10110"
/transl_table=11
BEGIN
1 MQVKNSVFLV LLAGLAGCAT LPSNGPTRGQ IEKTAQTPGH EASPIQIVPI QTIADVPEAD
61 QVAAGLLPEL APPPTDMIGP GDVLDINIYE AGVTLFSAAG GNGGLSQVGA SPGVQVQKLP
121 PTRVDDLGDI SIPYAGTLHV AGVTTGEVET MIRNSLAGMS QNPQVIVTLN QAITNSIIVG
181 GEVAKPGRLV LQTNRETLSD VIALAGGYRG EAKDLLLRIV RGGQSVDLRI NDLVENPKLD
241 VRAYPGDRLT LIDDPRTFSV LGASGRVEQV PFRRSSVSLA EAIATAGGVN PSIGNPAAIF
301 LFRYVRDEQG NEIPMVYHVN MMKTGSYFLA QRFAMRDKDV LYFGNAAANQ PSKLIQLISQ
361 LFSPILTITA AVQTVQNTN
//