LOCUS BAK65640.1 409 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 2-oxoisovalerate dehydrogenase alpha
subunit protein.
ACCESSION AP012222-965
PROTEIN_ID BAK65640.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="1.2.4.4"
/gene="bkdA1"
/locus_tag="SLG_09650"
/note="protein synonym:branched-chain alpha-keto acid
dehydrogenase E1 component alpha subunit"
/transl_table=11
BEGIN
1 MRNEPSFSLY IPEPDARPGG VPDFSHLRLE PAGAADRPHP ETRGLDMREV PYRFVRVLDE
61 DGQAVGPWKP DIPVAMLIRG LRAMMLTRIF DDRMFRAHRQ GKTSFYMKST GEEAIPVAQS
121 LMLGKGDMCF PTYRVLGWLM ARDYPLIDLV NQIFSNERDP LKGRQLPILY SARDYGFYSL
181 SGNLGSRMGH AVGWAMASAY KGDDKLALAY VGDGTTAEGD FHEALTFASV YHAPCLLCIT
241 NNQWAISSYS GFAGAQEAPL AARAIGFGLP GLRVDGNDFL AVWAATQWAV ERARANLGAT
301 LIEFVTYRVA GHSTSDDPTR YRPSDEASHF PLGDPVERLK RHLIALGEWD DARHAALTEE
361 LDQAVRAAMK EGEAVGTLGK SKPPVSEMFE HVFSEPDWRV IEQRREMGV
//