LOCUS BAK65636.1 461 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 fumarate hydratase protein.
ACCESSION AP012222-961
PROTEIN_ID BAK65636.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /EC_number="4.2.1.2"
/gene="fumC"
/locus_tag="SLG_09610"
/transl_table=11
BEGIN
1 MTETRTETDS IGAIDVPAQA YWGAQTQRSI ENFPFAPSER MPVGIIHALA IVKRAAARVN
61 RAHGLDGGIA DAIDEAAAEV IAGRHDDQFP LVIWQTGSGT QSNMNVNEVI AGRANELLTG
121 TRGGKSPVHP NDHVNKSQSS NDSFPTALHI AVARAATDEL LPALDYLRDL LEAKAQAWKD
181 IVKIGRTHLQ DATPLMLGQE FSGYARQLSN CRERIAHAVM HDVLALAQGG TAVGTGLNAP
241 EGFAEAVASE ISTLTDLPFY TAPNKFEALA SNDPLVHFSA ALSTLAVALT KIANDIRLLG
301 SGPRSGLGEL ELPANEPGSS IMPGKVNPTQ CEMLTMVAAQ VIGNHQAVTV GGLQGHLELN
361 VFKPLIGAAV LRSLHLLAVG MDSFAERCVE DMVPNEARIA ELVARSLMLV TALAPAIGYD
421 NAAKIAKHAH ESGLTLREAG LALGLVDEAL FDNLVRPETM V
//