LOCUS BAK65623.1 541 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium sp. SYK-6 choline dehydrogenase protein.
ACCESSION AP012222-948
PROTEIN_ID BAK65623.1
SOURCE Sphingobium sp. SYK-6
ORGANISM Sphingobium sp. SYK-6
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE 1 (bases 1 to 4199332)
AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
Masai,E., Yamazaki,S. and Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2011)
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
Fukuda,M., Yamazaki,S. and Fujita,N.
TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
Degrader of Lignin-Derived Biaryls and Monoaryls
JOURNAL J. Bacteriol. 194 (2), 534-535 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phred/phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
of Bioengineering, Nagaoka University of Technology.
FEATURES Qualifiers
source /db_xref="NBRC:103272"
/db_xref="taxon:627192"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 103272"
/organism="Sphingobium sp. SYK-6"
/strain="SYK-6"
protein /locus_tag="SLG_09480"
/transl_table=11
BEGIN
1 MASKTPDFIV IGSGSSGAVI AARLSEDPDA SVLVLEAGKR ERSMRLAMPI LFPFVMADPK
61 FNWSYMGEPE PFANDRQIRQ PRGKALGGSS MINGMLYARG HARDYDEWRQ LGNEGWSYDD
121 VLPYFRKSEN HWGEADHWHG KGGPLSIKVQ PKDNELYRRF IAAAKARGYA ERDTFHRAEQ
181 EGWGPPGLCI HEGQRGSTAA RFLIPAMSRP NLTVETGALV TRIEIEKGRA VAVHYVDREG
241 RTQRVAARQE IILSGGAYNS PQVLMLSGIG PADELAAHGI DMVHHLPGVG RNLQDHPSVA
301 MVVSARRDVT LTNQLRLDRA GIAGLQWLLT RGGMISDMPV TANGFLKTRP ELERPDAQCL
361 FQPTMIGAQL WFPGWRKPKA DVCAMASVLL RPEGRGWVKL RSADPTDKPR ILSNVLSTEN
421 DRAFFRRLIP QLRELFATAP LSEVLTGEVM PGPDVRTPDE IDAWVRNAIN TALHPVGTCA
481 MGQDDMAVVD ARLRVHGIAG LRVADAAIMP RIVGGNTNAA CIMIGEKAAD MVRQDHGLAG
541 S
//